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Table 1 Identification, cloning, and function of NBPs

From: Proteomic and functional analysis of NCS-1 binding proteins reveals novel signaling pathways required for inner ear development in zebrafish

Human Gene

Gene Name

Function

Interaction

Zebrafish Ortholog

mRNA Accession Number (riboprobe NTs)

Arf1

ADP-ribosylation factor 1

Trafficking/Exocytosis

GST-pulldown [28, 42]

NM_201452

NM_201452

(99–643)

Pi4kβ (Pik4cb)

Phosphatidylinositol 4-kinase beta

Trafficking/Exocytosis

Immuno-precipitation [29]

BM095643

FJ032032

(1–2083)

Vamp2

Vesicle associated membrane protein 2/Synaptobrevin 2

Exocytosis

Y2H

BC059626

NM_200005

(1–894)

Hint2

Histidine triad protein

Mitochondrial AMP-lysine hydrolase

Y2H

CN504819

FJ032031

(1–514)

Slc25a25 (SCaMC2)

Ca2+-dependent mitochondrial carrier

Mitochondrial ATP-Mg/Pi carrier

Y2H

NW_001513403

NM_213257

(65–1249)

Pink1

PTEN-induced kinase

Mitochondrial Kinase

Y2H

NW_001513662

FJ032033

(1–1725)

Trpc1

Classical transient receptor potential-1

Cation channel

GST-pulldown [31]

EE302043

XM_694363.3

(1097–2334)

Trpc5

Classical transient receptor potential-5

Cation channel

Immuno-precipitation and GST-pulldown [32]

AW343190

NM_001044827

(1–2395)

Ip3r (Itpr)

Inositol 1,4,5 trisphosphate receptor

Ca2+ release channel

Immuno-precipitation [30]

CK017406

XM_691322

(6591–8187)

Dan (Nbl-1)

Differential screening-selected gene aberrant in neuroblastoma

Extracellular BMP antagonist

Y2H

BC066387

FJ032030

(1–702)