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Table 6 Primer sequences of Danio rerio genes used in qRT-PCR for validation of microarray data.

From: Transcriptomic analysis of the zebrafish inner ear points to growth hormone mediated regeneration following acoustic trauma

Symbol

ID

Direction

Primer Sequence

PCR

ef1alpa

NM_131263

forward

CGACAAGAGAACCATCGAGAAGTT

Taqman

  

reverse

CCCAGGCGTACTTGAAGGA

Taqman

gh1

AY286447

forward

Applied Biosystems Assay ID:

Taqman

  

reverse

Dr03128643_m1

Taqman

junb

NM_213556

forward

Applied Biosystems Assay ID:

Taqman

  

reverse

Dr03204057_s1

Taqman

atoh1a

NM_131091

forward

GGCAGATGAGGGCAGACA

Taqman

  

reverse

CCTCTGTTTCTGCACGACGTT

Taqman

rb1

BC154730

forward

GCCCCTCCATCACAACCA

Taqman

  

reverse

GGCTCGGCCTCCATTACAG

Taqman

cdkn1b

NM_212792

forward

GAGAGCCGAGGAAAAGAAGCT

Taqman

  

reverse

GCGAGCGTTTGCTTTGACA

Taqman

smyhc1l

AF425742

forward

TGAGCAACTTGGTGAGAGTGGGAA

Sybr green

  

reverse

TCAGCTTCCTCCAGAGCAGTTTGT

Sybr green

zgc:66286

AF434191

forward

TTCCTGCCAATGCATCAGCACAT

Sybr green

  

reverse

CCGTTGCCCTCTTTGTCAAACACT

Sybr green

mhc1ze

NM_194425

forward

AGAGTGTGTGGACTGGCTCAACAA

Sybr green

  

reverse

AGAATCCAGTGGCCAGACAAGTGA

Sybr green

ppia

NM_212758

forward

AGAATTTCAGGCAGTTGTGCACGG

Sybr green

  

reverse

TGTGGTTTGTGAAGTCACCTCCCT

Sybr green