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Table 6 Datasets used in coexpression network analysis

From: Meta-analysis of gene coexpression networks in the post-mortem prefrontal cortex of patients with schizophrenia and unaffected controls

Dataset

Reference

Microarray Platform

Brain region(s)

No. of Subjects

    

CTL:SZ

Stanley Bahn

SMRI database

HG-U133A

Frontal BA46

31: 34

Stanley AltarC

SMRI database

HG-U133A

Frontal BA46/10

11: 9

*Mclean

HBTRC

HG-U133A

Prefrontal cortex (BA9)

26: 19

Mirnics

Garbett K. et al., 2008 [19]

HG-U133A/B

Prefrontal cortex (BA46)

6: 9

*Haroutunian

Katsel P. et al., 2005 [20]

HG-U133A/B

Frontal (BA10/46)

29: 31

GSE17612

Maycox P. et al., 2009 [21]

HG-U133 Plus 2.0

Anterior prefrontal cortex (BA10)

21: 26

*GSE21138

Narayan S. et al., 2008 [22]

HG-U133 Plus 2.0

Frontal (BA46)

29: 25

  1. SMRI, Stanley Medical Research Institute; HBTRC, Harvard Brain Tissue Resource Centre (Mclean66 collection).
  2. *Samples from these datasets have been used in previous coexpression network studies of schizophrenia [8, 10].