Skip to main content

Table 4 Primers and probes used for QRT-PCR. The sequences of forward, reverse and specific probes are listed sequentially for each gene (accession #).

From: Dorsal horn-enriched genes identified by DNA microarray, in situ hybridization and immunohistochemistry

Gene (GenBank accession #)

Bases

Sequence (5'-3')

Product size (bp)

NGFI-A (AF023087)

120–140

TATCCATGTTCGGGAGTTGGA

81

 

171–200

AATGAACTTCATGTTCATAGCATACAAAGT

 
 

142–170

CACCGCCTACTCAGTAGGTAACCACAGCA

 

Four Repeat Ion Channel (AF078779)

5127–5150

GGAGGAAGGACAACAATGAAGTCT

75

 

5183–5201

TTCGGAGCCACAGGAAGCT

 
 

5155–5177

TGTGCAAGATGAACCCCATGCCA

 

CAMK IV homolog (AI102205)

263–283

TGTGAAAAGCAAGCTCCCAAA

81

 

323–343

CAGGCTCAGGCCATAAATCCT

 
 

299–319

CTGCCATGCCTCCCTGGGAGG

 

EST (AI639118)

56–80

GAAGTTGCTCTGACTGAATGGATTT

123

 

153–178

TCACAGACTTACATCCTGTTTCTGAA

 
 

93–121

AGCTGTCACACTTGTTGTCGGAAGCACAC

 

Hippocalcin (D12573)

607–628

CCGGAAAAGAGGACTGAGAAAA

134

 

723–740

CTGCTGGGATCGCATTGC

 
 

630–656

CTTCCGCCAAATGGACACAAACAATGA

 

Synuclein beta (D17764)

227–247

AACAAAGGAGCAGGCATCTCA

127

 

336–353

TTGGGCCACTTCCTCTGG

 
 

274–296

CTGGGAACATTGCAGCAGCCACC

 

Zinc Finger Protein (X54249)

1870–1893

GAGAGTGCACACATCAGCATTAGA

98

 

1944–1967

TCCTTTTCACCATCGTGTAAGTCA

 
 

1918–1941

CAGCTCTGTACCTCAGCCGCCCAC

Â