- Research article
- Open Access
Inducible gene inactivation in neurons of the adult mouse forebrain
© Erdmann et al; licensee BioMed Central Ltd. 2007
Received: 10 April 2007
Accepted: 02 August 2007
Published: 02 August 2007
The analysis of the role of genes in important brain functions like learning, memory and synaptic plasticity requires gene inactivation at the adult stage to exclude developmental effects, adaptive changes or even lethality. In order to achieve temporally controlled somatic mutagenesis, the Cre/loxP-recombination system has been complemented with the tamoxifen-inducible fusion protein consisting of Cre recombinase and the mutated ligand binding domain of the human estrogen receptor (CreERT2). To induce recombination of conditional alleles in neurons of the adult forebrain, we generated a bacterial artificial chromosome-derived transgene expressing the CreERT2 fusion protein under control of the regulatory elements of the CaMKIIα gene (CaMKCreERT2 transgene).
We established three mouse lines harboring one, two and four copies of the CaMKCreERT2 transgene. The CaMKCreERT2 transgene displayed reliable and copy number-dependent expression of Cre recombinase specifically in neurons of the adult forebrain. Using Cre reporter mice we show very low background activity of the transgene in absence of the ligand and efficient induction of recombination upon tamoxifen treatment in all three lines. In addition, we demonstrate in mice harboring two conditional glucocorticoid receptor (GR) alleles and the CaMKCreERT2 transgene spatially restricted loss of GR protein expression in neurons of the adult forebrain upon tamoxifen treatment.
This is to our knowledge the first approach allowing highly efficient inducible gene inactivation in neurons of the adult mouse forebrain. This new approach will be a useful tool to dissect the function of specific genes in the adult forebrain. Effects of gene inactivation on pre- and postnatal brain development and compensatory mechanisms elicited by an early onset of gene inactivation can now be excluded.
The generation of mouse mutants harboring targeted inactivation of desired genes using homologous recombination in embryonic stem cells is a powerful tool to analyze their role in complex brain functions such as learning and memory, synaptic plasticity as well as neurogenesis and neuronal cell death [1–3]. However, inactivation of genes in the germline often results in a lethal phenotype that prevents further analysis of the targeted gene in the adult brain.
To bypass early lethality and to analyze functions of a gene particularly in the adult brain the Cre/loxP-recombination system, that allows to conditionally ablate a defined gene, was implemented. In the Cre/loxP-recombination system the bacteriophage P1 Cre recombinase is expressed in a cell-type specific manner. In the Cre expressing cells the recombinase mediates excision of an essential part of the targeted gene that has been flanked by two loxP recognition sequences in the same orientation [4, 5].
To drive the expression of Cre in the brain, in most cases short promotor fragments of genes with desired expression pattern have been cloned in front of a Cre cassette in a plasmid [6–8]. Since plasmid-derived transgenes show copy number-independent and often mosaic and ectopic expression [9, 10] the use of BAC (bacterial artificial chromosome)- or YAC (yeast artificial chromosome)-derived transgenes is in favor. In contrast to plasmids, BAC and YAC vectors harbor large genomic regions containing almost all regulatory elements of the gene locus that was chosen to drive Cre expression. However, a given gene locus may not only be expressed in the adult brain, but also during pre- and postnatal development . To overcome the necessity to find a gene locus that is active only at a desired time-point during development or at the adult stage fusion proteins consisting of Cre recombinase and a mutated ligand-binding domain (LBD) of a steroid hormone receptor have been developed to achieve ligand-dependent Cre activity. The mutated LBD retains the fusion protein in the cytoplasm and upon binding of a synthetic ligand it translocates into the nucleus, where it mediates the excision of the loxP-flanked DNA sequence [12–15]. It has been shown in vitro and in vivo that the CreERT2 is the most potent Cre fusion protein with low leakiness and highly efficient induction [13, 16]. The CreERT2 fusion protein was so far applied in peripheral cell-types/tissues [17–19] and within the nervous system in oligodendrocytes and Schwann cells , astrocytes [21–23] and neural stem cells . The verification of CreERT2-mediated recombination was only performed using Cre reporter mice. Cre reporter data are very helpful to detect ligand-independent (background) activity of the Cre and robust induction of recombination, but this type of analysis does not allow to assess incomplete induction. To analyze the extent of gene inactivation, expression analysis of the protein encoded by the targeted gene is mandatory.
In order to target neurons in the adult brain that participate in important brain functions like learning, memory and long term potentiation, we have chosen the CaMKIIα gene regulatory elements to drive CreERT2 expression in the forebrain including limbic structures like hippocampus and amygdala. We introduced the CreERT2 fusion protein in frame at the ATG of the CaMKIIα gene present on a large genomic fragment in a BAC vector using homologous recombination in bacteria. The established transgenic mouse lines (CaMKCreERT2) displayed copy number-dependent, forebrain-specific expression of the Cre recombinase. Using this transgene we show efficient forebrain-specific induction of recombination upon tamoxifen treatment with very low background activity in absence of the ligand restricted to the hippocampus. Unlike previous studies utilizing CreERT2 mediated recombination in the brain, we demonstrate for the first time by expression analysis of the protein encoded by the targeted gene, the high efficiency of this inducible gene inactivation system.
Copy number-dependent expression of the CreERT2-fusion protein in the adult mouse hippocampus
The modified genomic insert was released and separated from the BAC backbone and then introduced into the mouse germline by oocyte injection. Transgenic founder animals were identified by PCR and dot blot analysis of tail DNA. The F1 progeny was used to determine the copy number of the transgene by Southern blot (Fig. 1H–J). Three lines harboring either one, two or four copies of the transgene were chosen for further analyses. We investigated the expression and nuclear translocation of the CreERT2 fusion protein upon tamoxifen treatment by immunohistochemistry on hippocampal vibratome sections using an anti-Cre antibody. Transgenic animals were injected with either tamoxifen or vehicle 12 hours before dispatch. In the vehicle-treated animals the CreERT2 protein was located in the cytoplasm (Fig. 1B, D and 1F), whereas tamoxifen-treated animals displayed nuclear localization of the Cre recombinase in the hippocampus (Fig. 1C, E and 1G). In addition, copy number-dependent expression was observed, the four-copy line showed stronger expression of the CreERT2 fusion protein than the two-copy line which displayed a stronger Cre expression in the hippocampus than the one-copy line (Fig. 1B–J). Nuclear translocation and copy number-dependent CreERT2 expression was also observed in other brain regions, e.g. cortex (data not shown).
Targeted recombination in adult forebrain regions upon tamoxifen induction
To assess the ERT2-mediated control of Cre activity in absence of the ligand in forebrain neurons and to examine the efficiency of tamoxifen-induced Cre-mediated recombination, CaMKCreERT2 mice with different transgene copy numbers were crossed with ROSA26 Cre reporter mice (R26R allele)  to obtain R26R/CaMKCreERT2 mice. The Cre reporter line harbors a knock-in of a lacZ gene preceded by a stop cassette, flanked by two recognition sequences (loxP) for the Cre recombinase, in the ROSA26 locus. Upon tamoxifen treatment CreERT2 translocates into the nucleus and deletes the stop cassette thereby permitting β-galactosidase expression.
Since the use of the minimal number of transgene copies that allow efficient recombination upon tamoxifen induction is desired, we only characterized for the two-copy line the activity in absence of tamoxifen ("background") in more detail. At the cellular level, using cryosections, vehicle-treated R26R/CaMKCreERT2 mice of the two-copy line displayed only few granular neurons in the dentate gyrus and even less pyramidal neurons in the CA1 region of the hippocampus that underwent recombination of the reporter allele (Fig. 2D–F).
In order to compare the spatial activity of the inducible CaMKCreERT2 transgene with the constitutive CaMKCre transgene, β-galactosidase stained brain whole mount samples of adult R26R/CaMKCre mice were analyzed as well. Both, R26R/CaMKCreERT2 (two copies) and R26R/CaMKCre mice showed extensive recombination in hippocampus and cortex (Fig. 2B and 2C). However, the constitutive transgene caused additional recombination in olfactory bulbs, striatum and cerebellum (Fig. 2C). Immunohistochemical staining for Cre revealed a strong expression of CreERT2 protein in those regions showing recombination in R26R/CaMKCreERT2 mice (e.g. hippocampus, cortex). As shown for the constitutive CaMKCre line at the adult stage , we could detect only very low level of CreERT2 expression in striatum and thalamus and no expression in cerebellum of CaMKCreERT2 transgenic mice (data not shown). Using Cre reporter mice we did not observe Cre-mediated recombination in any of these regions after tamoxifen application (data not shown).
To quantify and compare recombination evoked by the constitutive CaMKCre transgene and the CaMKCreERT2 transgene, induced with 1 mg tamoxifen twice per day for five consecutive days, at the DNA level by Southern blot, we generated animals heterozygous for the conditional GR allele (GRflox)  harboring either the constitutive (GRflox/wt/CaMKCre) or the inducible Cre (GRflox/wt/CaMKCreERT2, two copies) transgene respectively. The analysis of adult samples of different brain regions revealed that the areas showing recombination using Cre reporter mice (e.g. hippocampus and cortex) display a comparable degree of recombination for both transgenes (Fig. 2G–I). In case of the cerebellum we detected, as expected from the Cre reporter data, no recombination of the GRflox allele for the induced CaMKCreERT2 transgene, but distinct recombination for the constitutive CaMKCre transgene (Fig. 2G and 2I).
Ablation of GR protein expression in the adult brain upon tamoxifen treatment using the CaMKCreERT2transgene
To identify neuronal subtypes that are targeted in the cortex by the CaMKCreERT2 transgene, we performed immunohistochemical double-stainings for CreERT2 and markers for the two major neuronal subtypes present in the cortex. GABAergic interneurons were identified by GAD65/67 expression and glutamatergic neurons by VGLUT1 expression. We detected no CreERT2 protein expression in GABAergic interneurons, whereas expression of CreERT2 was present in glutamatergic neurons (data not shown).
Effect of variations in transgene copy number and the applied tamoxifen dose on GR protein loss
It has been shown previously that efficient induction of recombination is dependent on the applied tamoxifen dose and the level of CreERT2expression as well as on the particular conditional allele [16, 20, 30]. Thus it is possible, that different conditional alleles require different levels of CreERT2 activity. The level of CreERT2 activity is dependent on the expression level of the CreERT2 protein and on the availability of tamoxifen. Since the CaMKCreERT2 transgene shows copy number-dependent CreERT2 expression, we determined if we can detect an interrelation of transgene copy number and tamoxifen dose for the recombination evoked by this transgene. For this purpose, we injected GRCaMKCreERT2 mice harboring one, two or four copies of the transgene with 1 mg tamoxifen for five consecutive days once per day (5 mg) or twice per day (10 mg) and analyzed the loss of GR protein in hippocampus, cortex and PVN.
Plasma corticosterone level [ng/ml] of adult tamoxifen-treated GRCaMKCreERT2 mice at diurnal trough
vs. one copy
vs. two copies
13 ± 5
39 ± 8*
n = 7
n = 9
8 ± 1
100 ± 20*
p < 0.05
n = 7
n = 9
15 ± 6
108 ± 19*
p < 0.05
p = 0.75
n = 5
n = 5
Brain-specific gene inactivation using the Cre/loxP-recombination system allows to investigate gene function in the adult brain in case the germline inactivation of the gene of interest causes lethality. However, most of the available brain-specific Cre-lines show onset of Cre expression before the development of the brain is completed [6, 29, 32]. Therefore, phenotypical changes can result from interferences during brain development and/or from deficiency of the respective protein in the adult brain .
To achieve a spatio-temporal control of Cre-mediated recombination in the adult brain, regulatory elements of the CaMKIIα gene have been already used to drive the expression of different Cre fusion proteins. The fusion of Cre recombinase with a modified ligand-binding domain (LBD) of a steroid hormone receptor (e.g. progesterone receptor or estrogen receptor) allows to regulate nuclear translocation and thereby activity of the Cre recombinase by administration of the cognate ligand. Expression of Cre recombinase fused to a mutated form of the human progesterone receptor-LBD resulted in incomplete recombination within the hippocampal cornu ammonis and the cortex upon RU 486 treatment, but no recombination was observed in the dentate gyrus . The fusion of a mutated ligand-binding domain of the estrogen receptor (ERT2)  onto both ends of the Cre recombinase, expressed under the control of the regulatory elements of the CaMKIIα gene, resulted in very weak recombination efficiency (5%–10% in hippocampal pyramidal and granular neurons) upon tamoxifen treatment . The fusion of one ERT2 to the C-terminal end of Cre recombinase  has been recently employed in oligodendrocytes, astrocytes and neural stem cells [20–24]. We have now generated transgenic mouse lines expressing the CreERT2fusion protein under the control of regulatory elements of the mouse CaMKIIα gene present on a large genomic DNA fragment isolated from a BAC library. This transgene allows highly efficient recombination of conditional genes in brain regions shown to be important for learning, memory and synaptic plasticity.
The CaMKCreERT2transgene displays forebrain-specific, copy number-dependent expression and permits inducible site-specific recombination
The use of plasmid-derived transgenes that contain small promoter fragments in front of an expression cassette results in copy number-independent transgene expression. In addition, variable degrees of ectopic and mosaic expression of the transgene is observed [9, 10, 34]. The use of BAC or YAC clones, that contain large regions of genomic DNA with almost all regulatory elements of the gene with desired expression in their native configuration, allows expression of the transgene that resembles the expression of the endogenous gene independent of the integration site [27, 35, 36]. Using the regulatory elements of the mouse CaMKIIα gene we have generated transgenic mice expressing the CreERT2 fusion protein in neurons of the adult forebrain. We obtained different lines harboring one, two or four copies of the transgene. As expected, the expression pattern of the transgene is identical in all analyzed transgenic lines and shows only copy number-dependent differences at the level of expression.
Using the ROSA26 Cre reporter we demonstrated the effective temporal regulation of CreERT2 activity by tamoxifen treatment in all three lines. In absence of the ligand noteworthy constitutive recombination occurs only within the dentate gyrus. Application of tamoxifen results in strong recombination within forebrain regions like hippocampus and cortex. Using the two-copy line we compared the degree of recombination with the one elicited by the constitutive CaMKCre line. Analysis of β-galactosidase stainings of double transgenic animals harboring a ROSA26 Cre reporter allele and the constitutively active CaMKCre revealed recombination in the entire brain. However, brain regions that show recombination in both, the constitutive and the inducible Cre transgene after tamoxifen treatment, display in the adult brain (ten weeks) a comparable degree of recombination when quantified by Southern blot. Since both transgenic lines show similar Cre expression, independent of the developmental stage, the observed differences in recombination pattern result from the different time period of nuclear Cre activity of both transgenes. Using a ROSA26 Cre reporter, we observe in case of the constitutive CaMKCre transgene the accumulated recombination and thereby β-galactosidase staining in all cells where Cre was active during development and adulthood until dispatch. Therefore, brain regions that show no or only weak Cre expression at the adult stage can nevertheless show β-galactosidase staining. In case of the CaMKCreERT2 transgene Cre is only transiently activated during the presence of tamoxifen. Thus the pattern of recombination reflects CreERT2 expression within this time period only.
Inducible ablation of GR protein expression in the adult brain depends on the copy number of the Cre transgene and the tamoxifen dose
We successfully employed the CaMKCreERT2 transgene in combination with a conditional GR allele (GRCaMKCreERT2 mice, two copies of the CreERT2 transgene) to achieve ablation of GR in neurons of the adult forebrain. Upon tamoxifen treatment, GRCaMKCreERT2 mice show loss of GR protein, whereas vehicle-treated mutants showed no alterations in GR expression compared to wild-type mice, reflecting the very low background activity of the CaMKCreERT2 transgene. In addition, we demonstrate for the hippocampus that an increase in transgene copy numbers allows the reduction of the tamoxifen dose required to achieve complete recombination.
Using the conditional GR allele we could show that using the two- or four-copy line of the CaMKCreERT2 transgene in combination with the injection of 1 mg tamoxifen twice per day for five consecutive days results in similar recombination efficiency, leading to complete loss of GR protein in the cortex, hippocampus, PVN and basolateral amygdala as well as a comparable increase of plasma corticosterone. Using the same tamoxifen dose the one-copy line displays only partial loss of GR protein in PVN and hippocampus resulting in a milder increase of plasma corticosterone. Since BAC-derived large genomic DNA fragments potentially carry additional genes we will use for further analyses of GRCaMKCreERT2 mice two copies of the CaMKCreERT2 transgene and apply 1 mg tamoxifen twice per day for five consecutive days. Moreover, we could induce MR protein loss upon the identical tamoxifen treatment in the brain regions targeted by the CaMKCreERT2 transgene using the two-copy line in combination with a conditional MR allele  (unpublished observation). However, other conditional alleles may require the use of four copies of the CaMKCreERT2 transgene in combination with the injection of 1 mg tamoxifen twice per day for five consecutive days, to achieve complete recombination.
The expression of the CreERT2-fusion protein under control of the regulatory elements of the CaMKIIα gene (CaMKCreERT2 transgene) allows inducible gene inactivation in neurons of the adult forebrain with very low background activity and highly efficient targeting upon tamoxifen treatment. The use of a BAC-based transgene resulted in a reliable and copy number-dependent transgene expression. By employing the CaMKCreERT2 transgene in combination with a conditional GR allele we were able to induce spatially and temporally restricted loss of GR protein dependent on transgene copy number and applied tamoxifen dose.
Generation of CaMKCreERT2transgenic mice
A bacterial artificial chromosome (BAC) harboring 143 kb of genomic DNA (RP24-243J21) was chosen from the mouse genome project . The genomic DNA-fragment contains, similar to the one used to generate a constitutive CaMKCre transgene , the mouse CaMKIIα locus with a 43 kb 5'upstream and a 100 kb 3'downstream region. This BAC was modified by homologous recombination to insert a cassette encoding a fusion protein (CreERT2) consisting of a codon-improved Cre recombinase (Cre)  and a mutated ligand-binding domain of the human estrogen receptor (ERT2)  as well as an ampicillin resistance cassette flanked by two FRT sites. The linear construct was electroporated into heat-induced EL250 bacteria  harboring the BAC. Clones with the recombinant BAC were induced with L-arabinose to express Flp recombinase that results in deletion of the ampicillin resistance cassette . The modified genomic fragment containing the CreERT2 knock-in at the ATG of the CaMKIIα gene was separated from the BAC backbone by NotI digestion and subsequent preparative pulse-field gel electrophoresis. The DNA was purified from the gel slice and microinjected into the pronucleus of FVB/N mouse oocytes . Transgenic offspring (founder) was identified by dot blot of tail DNA. A fragment of the coding sequence of Cre was labeled and used as probe. Founder mice were bred with C57Bl/6 mice to generate BAC-transgenic (CaMKCreERT2) mouse lines. Three different lines with one, two and four copies of the transgene were analyzed. The Cre-transgenic mice were bred with ROSA26 Cre reporter mice or with mice harboring a conditional GR allele (GRflox)  to generate the respective genotypes used for the experiments.
Tamoxifen (Sigma) was dissolved in sunflower seed oil/ethanol (10:1) mixture at a final concentration of 10 mg/ml. Eight weeks old mice were injected intraperitoneally with 1 mg of tamoxifen either once or twice per day for five consecutive days. Control animals were injected with 100 μl of sunflower seed oil/ethanol mixture (vehicle). If not otherwise specified, control and mutant mice possessed the same genotype, but differed in the treatment (control: vehicle, mutant: tamoxifen). Experimental animals for immunohistochemistry and Cre reporter analysis were sacrificed ten days after the last injection. For corticosterone measurement GRflox/flox (control) and GRflox/flox/CaMKCreERT2 (mutant) mice were both treated with 1 mg tamoxifen twice a day for five consecutive days and were sacrificed six weeks after the last injection to allow recovery from the tamoxifen treatment.
To determine plasma corticosterone, adult mice (14 weeks) were housed individually one week before the experiment (light on 9:00 – 21:00). Blood sampling was performed in the morning (starting at 10:00) by bleeding after decapitation, with the time from first handling to decapitation not exceeding 20 s, to determine plasma corticosterone at circadian trough. Plasma corticosterone was measured using a commercially available RIA kit (MP Biomedicals). Results are presented as mean ± SEM and were analyzed using unpaired, two-tailed Student's t test.
Immunohistochemistry and β-galactosidase staining
For immunohistochemical analysis, the dissected brains were postfixed with 4% paraformaldehyde at 4°C for 72 hrs. Coronal sections with a thickness of 50 μm were performed using a vibratome (Microm). The floating sections were processed for immunohistochemistry using the VECTASTAIN ABC system (Vector Laboratories) and diaminobenzidine (Sigma) incubation. Following primary antibodies have been used: polyclonal anti-Cre (diluted 1:3000)  and polyclonal anti-GR (diluted 1:1000) (Santa Cruz Biotechnology).
For β-galactosidase whole mount stainings, dissected brains were cut with a razor blade in the appropriate planes, washed three times with washing buffer (1 × PBS, 5 mM EGTA, 2 mM MgCl2, 0.01% sodium-deoxycholat and 0.02% NP-40) and were subsequently stained with X-gal staining solution (5 mM EGTA, 2 mM MgCl2, 0.01% sodium-deoxycholat, 0.02% NP-40, 10 mM K3 [Fe(CN)6], 10 mM K4 [Fe(CN)6] and 0.5 mg/ml X-gal in 1 × PBS) at 37°C over night. After the staining slices were postfixed with 4% paraformaldehyde at 4°C over night and kept in 1 × PBS at 4°C for analysis. For β-galactosidase staining of cryosections, dissected brains were frozen in O.C.T. compound (Tissue Tek, Sakura Finetek) on ethanol/dry ice and 10 μm sagital cryosections were prepared. Sections were fixed 10 min in 4% paraformaldehyde and β-galactosidase staining was performed as described for whole mount samples. Afterwards, sections were counterstained with nuclear fast red (Sigma) and mounted with Eukitt (O. Kindler).
Analysis of transgene copy numbers and quantification of recombination
Transgene copy number was determined by Southern blot of tail DNA digested with BamHI and hybridized with a DNA probe detecting sequences in the CaMKIIα promotor region. The probe was labeled by random-priming with α-32PdCTP. Relative band intensities were assessed by phosphoimager (Fuji) and the band originating from the endogenous CaMKIIα gene was calculated as two copies.
For analysis of Cre-mediated recombination, genomic DNA was isolated from different brain areas. The DNA was digested with SacI, blotted and hybridized with a probe detecting in case of the GRflox and the GRwt allele a fragment of similar size (7 kb) and in case of the GRnull allele a smaller fragment (4.8 kb). Signals were quantified by phosphoimager (Fuji) and percentage of recombination is calculated as signal intensity of the GRnull band divided by the sum of the signal intensities of the GRflox/GRwt band and GRnull band.
We thank Joachim Elzer for his technical support as well as Heike Alter and Steffi Stotz for microinjection. This work was supported by the "Deutsche Forschungsgemeinschaft" through Sonderforschungsbereiche 488 and 636, GRK 791/1.02, and Sachbeihilfe Schu 51/7-2, by the "Fonds der Chemischen Industrie", the European Union through grant LSHM-CT-2005-018652 (CRESCENDO) and the Bundesministerium für Bildung und Forschung (BMBF) through NGFN grants FZK 01GS01117, 01GS0477 and KGCV1/01GS0416.
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