Skip to main content

Table 1 Specific genes selected for expression analysis

From: Effect of lesion proximity on the regenerative response of long descending propriospinal neurons after spinal transection injury

Function Symbol Name
Immune and/or inflammatory Cxcl13 Chemokine (C-X-C motif) ligand 13
Cybb Cytochrome b-425, beta polypeptide
Fcgr2b Fc fragment of IgG, low affinity IIb, receptor
Fyb Fyn binding protein
Itgam Integrin alpha M
Lgals3 Lectin, galactose binding, soluble 3
Lcn2 Lipocalin 2
Pro/anti apoptotic Bax Bcl2-associated X protein
Casp2 Caspase 2
Casp3 Caspase 3
Dap Death-associated protein
Pycard PYD and CARD domain-containing protein
Gadd45g Growth arrest DNA damage inducible, gamma
Regeneration associated and/or neuroprotective Actb Actin, beta
Atf3 Activating transcription factor 3
Gadd45a Growth arrest and DNA damage inducible 4, alpha
Gap43 Growth-associated protein 43
Hspb1 Heat shock protein 27
Jun Jun oncogene, mRNA
Sox11 SYR-box containing gene 11
Stmn2 Stathmin-like 2
Stat3 Signal transducer and activator of transcription 3
Tspo Translocator protein
Tubb3 Tubulin—beta 3
Surface receptor and/or growth factor Artn Artemin
Bdnf Brain-derived neurotrophic factor
Gfra1 Glial cell line derived neurotrophic factor family receptor alpha 1
Gfra3 Glial cell line derived neurotrophic factor family receptor alpha 3
Hcrt Orexin (Hypocretin)
Igf1 Insulin-like growth factor 1
Lifr Leukemia inhibitory factor receptor
Ncam1 Neural cell adhesion molecule 1
Ntrk2 Neurotrophic tyrosine kinase, receptor type 2
Ret Ret proto-oncogene
  1. Genes selected for analysis. 34 different genes were specifically chosen to be profiled at 3-days post injury. The genes chosen for analysis were previously found to be significantly up or down-regulated 3-days post injury in LDPT and/or TPS neurons following gene expression and qRT PCR array analyses [17, 18]. Expression levels of these 34 specific genes were assessed using a custom-designed multiplex  assay. Stmn2 is also known as SCG10