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Table 4 Top blood annotated DML (p < 0.0001); PD cases with 10+ vs 0 years of plantation work

From: Genome-wide epigenetic analyses in Japanese immigrant plantation workers with Parkinson’s disease and exposure to organochlorines reveal possible involvement of glial genes and pathways involved in neurotoxicity

PROBESET ID

CHR

CpG location

Gene

p-value

Methylationa

cg25608490

7

TSS1500; Body

WNT16

9.04E−07

+

cg12179661

9

5′UTR

ENTPD8

1.47E−06

cg08435683

20

3′UTR

SLC23A2

1.51E−06

+

cg02286380

17

Body

ARRB2

1.53E−06

+

cg16395997

1

Body

WDR8

3.82E−06

+

cg00145955

16

Body

QPRT

4.02E−06

cg04577162

7

Body

RFC2

4.62E−06

+

cg14689338

5

Body

MYO10

6.05E−06

cg03997039

16

Body

QPRT

6.11E−06

cg26021714

14

Body

RNASE2

7.65E−06

+

cg14070845

17

Body

SPAG5

8.37E−06

+

cg23688843

X

TSS1500

CCNB3

8.51E−06

cg02237172

3

Body

ZMYND10

9.38E−06

+

cg12359315

3

Body

SLC6A20

1.13E−05

+

cg16815625

8

Body

TRAPPC9

1.38E−05

+

cg14177914

1

TSS1500

C1orf61

1.53E−05

+

cg01676795

7

Body

POR

1.63E−05

+

cg05978707

2

Body

SNTG2

1.71E−05

cg12871835

6

TSS1500

SGK1

1.75E−05

+

cg13847137

4

Body

PPP2R2C

1.84E−05

cg03098589

10

Body

VTI1A

1.95E−05

+

cg18011273

4

Body

SORCS2

1.97E−05

cg21699894

20

5′UTR; Body

TOX2

2.11E−05

+

cg13478928

1

Body

LHX8

2.13E−05

+

cg07430820

17

Body; 1stExon; 5′UTR

CHD3

2.16E−05

cg06145336

2

TSS1500

HOXD3

2.33E−05

+

cg04172851

6

TSS200; TSS200

XPO5; POLH

2.47E−05

+

cg00114346

7

Body

DNAJB6

2.73E−05

+

cg10763483

13

TSS1500

C13orf33

2.79E−05

cg11202380

1

3′UTR

AK2

2.91E−05

+

cg08688629

10

TSS1500

KNDC1

3.00E−05

cg07017164

17

Body

MAPT

3.23E−05

cg06302533

5

TSS200

PCDHB18

3.59E−05

+

cg14101659

6

Body

EXOC2

3.65E−05

+

cg20134658

20

5′UTR

C20orf11

4.07E−05

  1. a Hyper (+) or Hypo (−) methylation